Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.67□□□□□ -0.7
Lsm3P62311 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.67□□□□□ -0.7
Lsm3P62311 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Lsm3P62311 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm45161-201ENSMUST00000207316 2263 ntBASIC10.67□□□□□ -0.7
Lsm3P62311 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Lsm3P62311 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lsm3P62311 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Zfp109-202ENSMUST00000206362 2932 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Lsm3P62311 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Lsm3P62311 Ncapd3-205ENSMUST00000216677 5149 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm11637-201ENSMUST00000120601 592 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm24694-201ENSMUST00000180054 110 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Gm27663-201ENSMUST00000184839 110 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm37922-201ENSMUST00000195596 455 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Gm42693-201ENSMUST00000196779 631 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC10.66□□□□□ -0.7
Lsm3P62311 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.66□□□□□ -0.7
Lsm3P62311 AC126253.1-202ENSMUST00000226732 835 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Lsm3P62311 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.66□□□□□ -0.7
Lsm3P62311 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Thbd-201ENSMUST00000099270 3723 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Lsm3P62311 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lsm3P62311 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Lsm3P62311 Ccdc136-208ENSMUST00000180829 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.66□□□□□ -0.7
Lsm3P62311 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.66□□□□□ -0.7
Lsm3P62311 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Lsm3P62311 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Lsm3P62311 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.65□□□□□ -0.7
Lsm3P62311 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC10.65□□□□□ -0.7
Lsm3P62311 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 Plekha7-207ENSMUST00000182511 4502 ntTSL 2 BASIC10.65□□□□□ -0.7
Lsm3P62311 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm43242-201ENSMUST00000199507 1776 ntBASIC10.65□□□□□ -0.7
Lsm3P62311 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC10.65□□□□□ -0.7
Lsm3P62311 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC10.65□□□□□ -0.7
Lsm3P62311 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm27306-201ENSMUST00000183970 107 ntBASIC10.65□□□□□ -0.7
Lsm3P62311 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Lsm3P62311 Gm19220-201ENSMUST00000222682 803 ntBASIC10.65□□□□□ -0.7
Lsm3P62311 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Lsm3P62311 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Lsm3P62311 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC10.65□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms