Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm38241-201ENSMUST00000192641 898 ntBASIC13.11□□□□□ -0.31
Tpm1P58771 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.11□□□□□ -0.31
Tpm1P58771 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tpm1P58771 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.11□□□□□ -0.31
Tpm1P58771 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.11□□□□□ -0.31
Tpm1P58771 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Tpm1P58771 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Tpm1P58771 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Tpm1P58771 AC167022.1-201ENSMUST00000218647 1458 ntBASIC13.1□□□□□ -0.31
Tpm1P58771 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm5035-201ENSMUST00000215581 927 ntBASIC13.1□□□□□ -0.31
Tpm1P58771 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Tpm1P58771 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.1□□□□□ -0.31
Tpm1P58771 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Tpm1P58771 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Tpm1P58771 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Tpm1P58771 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm44415-201ENSMUST00000204151 2112 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tpm1P58771 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm11478-201ENSMUST00000117851 599 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Rprl1-201ENSMUST00000158050 327 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm29127-201ENSMUST00000188304 517 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Gm38230-201ENSMUST00000193572 1159 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Gm9794-201ENSMUST00000202370 423 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm17931-201ENSMUST00000208132 634 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm40466-201ENSMUST00000212174 422 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Gm10686-201ENSMUST00000215389 3247 ntBASIC13.09□□□□□ -0.31
Tpm1P58771 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tpm1P58771 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Tpm1P58771 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.09□□□□□ -0.31
Tpm1P58771 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.09□□□□□ -0.31
Tpm1P58771 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Tpm1P58771 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms