Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Gm5279-201ENSMUST00000199575 745 ntBASIC9.16□□□□□ -0.94
Ctdsp1P58466 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 AC164629.2-201ENSMUST00000217916 270 ntBASIC9.16□□□□□ -0.94
Ctdsp1P58466 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.16□□□□□ -0.94
Ctdsp1P58466 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Wnk1-224ENSMUST00000203030 8163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Ctdsp1P58466 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Sgca-205ENSMUST00000166320 1428 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Gm12416-201ENSMUST00000120911 1008 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Cd63-ps-201ENSMUST00000145417 875 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Gm27321-201ENSMUST00000185021 205 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Gm37597-201ENSMUST00000191853 382 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 AC192088.1-201ENSMUST00000227561 301 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.15□□□□□ -0.94
Ctdsp1P58466 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Ctdsp1P58466 Ppp4r1l-ps-202ENSMUST00000132669 2767 ntBASIC9.15□□□□□ -0.95
Ctdsp1P58466 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Zfyve26-201ENSMUST00000021547 9391 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Ctdsp1P58466 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Ctdsp1P58466 Rims2-204ENSMUST00000226410 3685 ntBASIC9.14□□□□□ -0.95
Ctdsp1P58466 Gm19972-201ENSMUST00000218180 5664 ntBASIC9.14□□□□□ -0.95
Ctdsp1P58466 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms