Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.83□□□□□ -0.52
SmoP56726 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.83□□□□□ -0.52
SmoP56726 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
SmoP56726 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
SmoP56726 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.82□□□□□ -0.52
SmoP56726 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SmoP56726 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SmoP56726 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
SmoP56726 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gm26047-201ENSMUST00000157308 113 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gm22334-201ENSMUST00000158070 133 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gm18367-201ENSMUST00000176139 600 ntBASIC11.82□□□□□ -0.52
SmoP56726 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gm12407-201ENSMUST00000180219 324 ntBASIC11.82□□□□□ -0.52
SmoP56726 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm26047-202ENSMUST00000198840 115 ntBASIC11.82□□□□□ -0.52
SmoP56726 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.82□□□□□ -0.52
SmoP56726 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.82□□□□□ -0.52
SmoP56726 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.82□□□□□ -0.52
SmoP56726 Gm17831-201ENSMUST00000205579 900 ntBASIC11.82□□□□□ -0.52
SmoP56726 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
SmoP56726 Gm44506-201ENSMUST00000206278 965 ntBASIC11.82□□□□□ -0.52
SmoP56726 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC11.82□□□□□ -0.52
SmoP56726 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.82□□□□□ -0.52
SmoP56726 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.82□□□□□ -0.52
SmoP56726 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.82□□□□□ -0.52
SmoP56726 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SmoP56726 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.82□□□□□ -0.52
SmoP56726 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.82□□□□□ -0.52
SmoP56726 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SmoP56726 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SmoP56726 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.81□□□□□ -0.52
SmoP56726 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.81□□□□□ -0.52
SmoP56726 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SmoP56726 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC11.81□□□□□ -0.52
SmoP56726 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm12176-201ENSMUST00000121420 875 ntBASIC11.81□□□□□ -0.52
SmoP56726 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.81□□□□□ -0.52
SmoP56726 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.81□□□□□ -0.52
SmoP56726 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.81□□□□□ -0.52
SmoP56726 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC11.81□□□□□ -0.52
SmoP56726 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SmoP56726 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.81□□□□□ -0.52
SmoP56726 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SmoP56726 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SmoP56726 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms