Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NrlP54846 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.55□□□□□ -0.4
NrlP54846 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
NrlP54846 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.55□□□□□ -0.4
NrlP54846 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.55□□□□□ -0.4
NrlP54846 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.55□□□□□ -0.4
NrlP54846 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.55□□□□□ -0.4
NrlP54846 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Gm10731-201ENSMUST00000181171 448 ntBASIC12.55□□□□□ -0.4
NrlP54846 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
NrlP54846 Gm38117-201ENSMUST00000194653 939 ntBASIC12.55□□□□□ -0.4
NrlP54846 Gm44506-201ENSMUST00000206278 965 ntBASIC12.55□□□□□ -0.4
NrlP54846 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.55□□□□□ -0.4
NrlP54846 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.55□□□□□ -0.4
NrlP54846 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NrlP54846 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NrlP54846 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.54□□□□□ -0.4
NrlP54846 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NrlP54846 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.54□□□□□ -0.4
NrlP54846 Mir1956-201ENSMUST00000157748 65 ntBASIC12.54□□□□□ -0.4
NrlP54846 Gm24844-201ENSMUST00000158679 127 ntBASIC12.54□□□□□ -0.4
NrlP54846 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.54□□□□□ -0.4
NrlP54846 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.54□□□□□ -0.4
NrlP54846 Gm3551-201ENSMUST00000190750 664 ntBASIC12.54□□□□□ -0.4
NrlP54846 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NrlP54846 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NrlP54846 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.54□□□□□ -0.4
NrlP54846 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NrlP54846 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NrlP54846 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
NrlP54846 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.54□□□□□ -0.4
NrlP54846 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NrlP54846 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.53□□□□□ -0.4
NrlP54846 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.53□□□□□ -0.4
NrlP54846 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NrlP54846 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms