Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cacnb3P54285 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cacnb3P54285 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacnb3P54285 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cacnb3P54285 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Cacnb3P54285 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cacnb3P54285 Gm13347-201ENSMUST00000120298 1353 ntBASIC13.7□□□□□ -0.22
Cacnb3P54285 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Rubie-203ENSMUST00000227803 2430 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm7741-201ENSMUST00000181445 989 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm6114-201ENSMUST00000182472 968 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Mir8093-201ENSMUST00000185043 137 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Cacnb3P54285 AC134869.4-202ENSMUST00000224350 837 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 AC118639.2-201ENSMUST00000226289 223 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 AC165154.1-201ENSMUST00000226661 340 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm4978-201ENSMUST00000071565 801 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.69□□□□□ -0.22
Cacnb3P54285 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cacnb3P54285 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Cacnb3P54285 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm12247-201ENSMUST00000117585 670 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC13.68□□□□□ -0.22
Cacnb3P54285 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC13.68□□□□□ -0.22
Cacnb3P54285 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacnb3P54285 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cacnb3P54285 n-R5s185-201ENSMUST00000083953 119 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.68□□□□□ -0.22
Cacnb3P54285 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Cacnb3P54285 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cacnb3P54285 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms