Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Gm28251-201ENSMUST00000188835 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm37318-201ENSMUST00000194325 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm38017-201ENSMUST00000194768 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Gm37287-201ENSMUST00000195449 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm37793-201ENSMUST00000195548 695 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 AU022133-201ENSMUST00000200601 873 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Gm6450-201ENSMUST00000200896 574 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.64□□□□□ -0.55
Pdx1P52946 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.64□□□□□ -0.55
Pdx1P52946 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Pdx1P52946 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Pdx1P52946 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Pdx1P52946 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdx1P52946 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Pdx1P52946 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
Pdx1P52946 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.63□□□□□ -0.55
Pdx1P52946 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.63□□□□□ -0.55
Pdx1P52946 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Gm11663-201ENSMUST00000117888 290 ntBASIC11.63□□□□□ -0.55
Pdx1P52946 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.63□□□□□ -0.55
Pdx1P52946 Gm38314-201ENSMUST00000195709 625 ntBASIC11.63□□□□□ -0.55
Pdx1P52946 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.63□□□□□ -0.55
Pdx1P52946 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Pdx1P52946 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Pdx1P52946 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.63□□□□□ -0.55
Pdx1P52946 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Pdx1P52946 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Pdx1P52946 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Pdx1P52946 Gm15207-201ENSMUST00000119259 442 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC11.62□□□□□ -0.55
Pdx1P52946 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Gm25732-201ENSMUST00000175168 60 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Pdx1P52946 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.62□□□□□ -0.55
Pdx1P52946 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Pdx1P52946 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Pdx1P52946 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.62□□□□□ -0.55
Pdx1P52946 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms