Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm7553-201ENSMUST00000185805 1426 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm9796-201ENSMUST00000062249 2250 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm15824-201ENSMUST00000119516 955 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm13342-201ENSMUST00000121055 207 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm1335-201ENSMUST00000121653 386 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm2639-201ENSMUST00000156881 1297 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm27682-201ENSMUST00000183930 110 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm18711-201ENSMUST00000199341 750 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm39404-201ENSMUST00000216350 313 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Tyms-ps-201ENSMUST00000219550 915 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 AC022775.2-201ENSMUST00000227885 646 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 AC154671.1-201ENSMUST00000228617 1578 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.74□□□□□ -0.85
Nkx2-1P50220 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Nkx2-1P50220 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Nkx2-1P50220 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm44711-201ENSMUST00000205414 1264 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm40466-201ENSMUST00000212174 422 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm807-202ENSMUST00000224929 408 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm8155-201ENSMUST00000216363 1612 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Gm18986-201ENSMUST00000216029 1986 ntBASIC9.73□□□□□ -0.85
Nkx2-1P50220 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Nkx2-1P50220 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms