Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Gm6963-201ENSMUST00000147879 379 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Vps4bP46467 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm27341-201ENSMUST00000183570 106 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.96□□□□□ -0.49
Vps4bP46467 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm8956-201ENSMUST00000203939 825 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC11.96□□□□□ -0.49
Vps4bP46467 Gm21769-201ENSMUST00000211922 111 ntBASIC11.96□□□□□ -0.49
Vps4bP46467 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Vps4bP46467 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.96□□□□□ -0.5
Vps4bP46467 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Vps4bP46467 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Vps4bP46467 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.5
Vps4bP46467 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.95□□□□□ -0.5
Vps4bP46467 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vps4bP46467 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.95□□□□□ -0.5
Vps4bP46467 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.95□□□□□ -0.5
Vps4bP46467 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.95□□□□□ -0.5
Vps4bP46467 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Gm5070-201ENSMUST00000177599 862 ntBASIC11.95□□□□□ -0.5
Vps4bP46467 Gm27046-201ENSMUST00000182160 463 ntBASIC11.95□□□□□ -0.5
Vps4bP46467 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.95□□□□□ -0.5
Vps4bP46467 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Vps4bP46467 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC11.95□□□□□ -0.5
Vps4bP46467 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Vps4bP46467 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.95□□□□□ -0.5
Vps4bP46467 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11.95□□□□□ -0.5
Vps4bP46467 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Vps4bP46467 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Vps4bP46467 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Vps4bP46467 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Vps4bP46467 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms