Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Fen1P39749 Gm6222-202ENSMUST00000182143 629 ntBASIC11.85□□□□□ -0.51
Fen1P39749 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fen1P39749 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.85□□□□□ -0.51
Fen1P39749 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.85□□□□□ -0.51
Fen1P39749 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.85□□□□□ -0.51
Fen1P39749 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Fen1P39749 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.85□□□□□ -0.51
Fen1P39749 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.85□□□□□ -0.51
Fen1P39749 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fen1P39749 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Fen1P39749 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC11.85□□□□□ -0.51
Fen1P39749 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.85□□□□□ -0.51
Fen1P39749 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Fen1P39749 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Fen1P39749 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Fen1P39749 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.84□□□□□ -0.51
Fen1P39749 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Btrc-209ENSMUST00000224478 2194 ntBASIC11.84□□□□□ -0.51
Fen1P39749 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.84□□□□□ -0.51
Fen1P39749 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Fen1P39749 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Fen1P39749 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.84□□□□□ -0.51
Fen1P39749 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Fen1P39749 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fen1P39749 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Fen1P39749 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.83□□□□□ -0.52
Fen1P39749 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Fen1P39749 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.83□□□□□ -0.52
Fen1P39749 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.83□□□□□ -0.52
Fen1P39749 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC11.83□□□□□ -0.52
Fen1P39749 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC11.83□□□□□ -0.52
Fen1P39749 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.83□□□□□ -0.52
Fen1P39749 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC11.83□□□□□ -0.52
Fen1P39749 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.83□□□□□ -0.52
Fen1P39749 Gm3890-201ENSMUST00000182416 207 ntBASIC11.83□□□□□ -0.52
Fen1P39749 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Fen1P39749 Gm37201-201ENSMUST00000191845 523 ntBASIC11.83□□□□□ -0.52
Fen1P39749 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms