Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.05□□□□□ -0.48
Mmp13P33435 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mmp13P33435 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC12.05□□□□□ -0.48
Mmp13P33435 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.05□□□□□ -0.48
Mmp13P33435 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC12.05□□□□□ -0.48
Mmp13P33435 AA914427-201ENSMUST00000193194 1166 ntBASIC12.05□□□□□ -0.48
Mmp13P33435 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.05□□□□□ -0.48
Mmp13P33435 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.05□□□□□ -0.48
Mmp13P33435 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Mmp13P33435 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC12.05□□□□□ -0.48
Mmp13P33435 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Mmp13P33435 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Mmp13P33435 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Mmp13P33435 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Mmp13P33435 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Mmp13P33435 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mmp13P33435 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm14130-201ENSMUST00000118417 987 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Gm14441-201ENSMUST00000121960 540 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.04□□□□□ -0.48
Mmp13P33435 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC12.04□□□□□ -0.48
Mmp13P33435 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm26361-201ENSMUST00000158868 186 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm5869-201ENSMUST00000200248 1257 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC12.04□□□□□ -0.48
Mmp13P33435 Gm9996-201ENSMUST00000070359 913 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Mmp13P33435 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Mmp13P33435 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.04□□□□□ -0.48
Mmp13P33435 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Mmp13P33435 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Mmp13P33435 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Mmp13P33435 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.03□□□□□ -0.48
Mmp13P33435 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm12164-201ENSMUST00000121695 551 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Mmp13P33435 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.03□□□□□ -0.48
Mmp13P33435 Gm5070-201ENSMUST00000177599 862 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Gm25700-201ENSMUST00000177693 110 ntBASIC12.03□□□□□ -0.48
Mmp13P33435 Gm2383-201ENSMUST00000181461 807 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms