Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
RxrbP28704 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 Gm13226-201ENSMUST00000117838 404 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.83□□□□□ -0.52
RxrbP28704 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.83□□□□□ -0.52
RxrbP28704 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Gm37201-201ENSMUST00000191845 523 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.83□□□□□ -0.52
RxrbP28704 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Zeb2-203ENSMUST00000076836 3913 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.83□□□□□ -0.52
RxrbP28704 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.83□□□□□ -0.52
RxrbP28704 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RxrbP28704 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.82□□□□□ -0.52
RxrbP28704 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
RxrbP28704 Gm13570-201ENSMUST00000140763 309 ntBASIC11.82□□□□□ -0.52
RxrbP28704 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.82□□□□□ -0.52
RxrbP28704 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.82□□□□□ -0.52
RxrbP28704 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.82□□□□□ -0.52
RxrbP28704 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.82□□□□□ -0.52
RxrbP28704 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RxrbP28704 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RxrbP28704 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.81□□□□□ -0.52
RxrbP28704 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
RxrbP28704 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.81□□□□□ -0.52
RxrbP28704 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.81□□□□□ -0.52
RxrbP28704 Gm14999-201ENSMUST00000121039 624 ntBASIC11.81□□□□□ -0.52
RxrbP28704 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Gm28196-201ENSMUST00000187719 640 ntBASIC11.81□□□□□ -0.52
RxrbP28704 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.81□□□□□ -0.52
RxrbP28704 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.81□□□□□ -0.52
RxrbP28704 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RxrbP28704 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
RxrbP28704 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.81□□□□□ -0.52
RxrbP28704 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms