Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.14□□□□□ -0.47
Nfkb1P25799 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.14□□□□□ -0.47
Nfkb1P25799 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nfkb1P25799 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nfkb1P25799 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.13□□□□□ -0.47
Nfkb1P25799 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm13888-201ENSMUST00000119148 422 ntBASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm9540-201ENSMUST00000188230 478 ntBASIC12.13□□□□□ -0.47
Nfkb1P25799 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gm44545-201ENSMUST00000208262 746 ntBASIC12.13□□□□□ -0.47
Nfkb1P25799 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.13□□□□□ -0.47
Nfkb1P25799 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Nfkb1P25799 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nfkb1P25799 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm44551-201ENSMUST00000208804 171 ntBASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm45398-201ENSMUST00000210561 165 ntBASIC12.12□□□□□ -0.47
Nfkb1P25799 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.12□□□□□ -0.47
Nfkb1P25799 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Nfkb1P25799 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Nfkb1P25799 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Nfkb1P25799 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms