Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm16570-201ENSMUST00000161951 436 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm25732-201ENSMUST00000175168 60 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm4310-201ENSMUST00000177847 889 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm9192-201ENSMUST00000183221 985 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm37436-201ENSMUST00000193842 1085 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm35960-201ENSMUST00000202712 767 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm43974-201ENSMUST00000205080 684 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm10288-201ENSMUST00000084614 537 ntBASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Tnfrsf1bP25119 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm14058-201ENSMUST00000116082 735 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm14724-201ENSMUST00000118400 537 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm15207-201ENSMUST00000119259 442 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm8566-201ENSMUST00000120174 465 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm11450-201ENSMUST00000121144 333 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm18734-201ENSMUST00000172937 808 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm5732-201ENSMUST00000182596 1007 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm8100-201ENSMUST00000182906 988 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm38117-201ENSMUST00000194653 939 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 AC155637.1-201ENSMUST00000218560 636 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Tnfrsf1bP25119 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms