Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.55□□□□□ -0.88
Cdx1P18111 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Ilf3-202ENSMUST00000115414 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 D930048N14Rik-202ENSMUST00000117859 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Rims2-204ENSMUST00000226410 3685 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Mir686-201ENSMUST00000102174 109 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm12241-201ENSMUST00000118330 726 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm13350-201ENSMUST00000120519 479 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm6161-201ENSMUST00000121942 1102 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.55□□□□□ -0.88
Cdx1P18111 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm6254-201ENSMUST00000168178 1072 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm6153-201ENSMUST00000172004 1058 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm27243-201ENSMUST00000183964 521 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm27516-201ENSMUST00000184237 98 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm5641-202ENSMUST00000198699 1080 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm44064-201ENSMUST00000204964 1087 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm45930-201ENSMUST00000221330 292 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Cdx1P18111 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm5403-201ENSMUST00000117105 2795 ntBASIC9.55□□□□□ -0.88
Cdx1P18111 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.55□□□□□ -0.88
Cdx1P18111 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Cdx1P18111 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm19692-201ENSMUST00000203856 2084 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm18630-201ENSMUST00000222109 1397 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Cdx1P18111 Gm14350-201ENSMUST00000116642 640 ntBASIC9.54□□□□□ -0.88
Cdx1P18111 Gm11439-201ENSMUST00000118598 409 ntBASIC9.54□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 94.4 ms