Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm15784-201ENSMUST00000120260 1462 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccl3P10855 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm12274-201ENSMUST00000120062 385 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.37□□□□□ -0.75
Ccl3P10855 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Ighv2-1-201ENSMUST00000170946 353 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm43380-201ENSMUST00000200421 220 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.37□□□□□ -0.75
Ccl3P10855 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Ccl3P10855 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Ccl3P10855 AC159376.1-201ENSMUST00000218504 630 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Gm5468-202ENSMUST00000227851 682 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.37□□□□□ -0.75
Ccl3P10855 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Ccl3P10855 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.37□□□□□ -0.75
Ccl3P10855 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ccl3P10855 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm43334-201ENSMUST00000197740 1318 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm13549-201ENSMUST00000118339 796 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Gm13422-201ENSMUST00000118834 504 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Gm14395-201ENSMUST00000120494 563 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl3P10855 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC10.36□□□□□ -0.75
Ccl3P10855 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Gm43163-201ENSMUST00000196571 442 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm18968-201ENSMUST00000221319 862 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccl3P10855 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm8325-201ENSMUST00000099086 453 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ccl3P10855 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ccl3P10855 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.36□□□□□ -0.75
Ccl3P10855 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Ccl3P10855 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms