Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Hoxc6P10629 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxc6P10629 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.04□□□□□ -0.32
Hoxc6P10629 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Hoxc6P10629 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Hoxc6P10629 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.03□□□□□ -0.32
Hoxc6P10629 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm4294-201ENSMUST00000105169 614 ntBASIC13.03□□□□□ -0.32
Hoxc6P10629 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm26989-201ENSMUST00000182608 749 ntBASIC13.03□□□□□ -0.32
Hoxc6P10629 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.03□□□□□ -0.32
Hoxc6P10629 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Gm39288-201ENSMUST00000210554 446 ntBASIC13.03□□□□□ -0.32
Hoxc6P10629 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Hoxc6P10629 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Hoxc6P10629 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Hoxc6P10629 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 CT009757.3-201ENSMUST00000223367 2320 ntBASIC13.02□□□□□ -0.32
Hoxc6P10629 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC13.02□□□□□ -0.32
Hoxc6P10629 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Hoxc6P10629 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm12247-201ENSMUST00000117585 670 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm12791-201ENSMUST00000120788 655 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm5257-201ENSMUST00000121823 790 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Mir6923-201ENSMUST00000184592 72 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm8197-202ENSMUST00000193422 934 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm43778-201ENSMUST00000199438 199 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm43380-201ENSMUST00000200421 220 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm44552-201ENSMUST00000205458 1247 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm17825-201ENSMUST00000206836 794 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm45500-201ENSMUST00000211676 803 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm18968-201ENSMUST00000221319 862 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm18642-201ENSMUST00000206642 1400 ntBASIC13.02□□□□□ -0.33
Hoxc6P10629 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Hoxc6P10629 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Hoxc6P10629 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Hoxc6P10629 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms