Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.49□□□□□ -0.41
TnfP06804 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TnfP06804 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TnfP06804 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.48□□□□□ -0.41
TnfP06804 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TnfP06804 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TnfP06804 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm11960-201ENSMUST00000122068 925 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm14665-201ENSMUST00000122294 557 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Gm6485-201ENSMUST00000160676 439 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm23771-201ENSMUST00000178702 110 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Gm37299-201ENSMUST00000193951 826 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm9645-201ENSMUST00000197131 792 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm8574-201ENSMUST00000203207 924 ntBASIC12.48□□□□□ -0.41
TnfP06804 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Gm44551-201ENSMUST00000208804 171 ntBASIC12.48□□□□□ -0.41
TnfP06804 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.48□□□□□ -0.41
TnfP06804 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.48□□□□□ -0.41
TnfP06804 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.48□□□□□ -0.41
TnfP06804 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.48□□□□□ -0.41
TnfP06804 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
TnfP06804 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TnfP06804 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
TnfP06804 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.47□□□□□ -0.41
TnfP06804 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.47□□□□□ -0.41
TnfP06804 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.47□□□□□ -0.41
TnfP06804 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Gm21092-201ENSMUST00000178995 955 ntBASIC12.47□□□□□ -0.41
TnfP06804 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.47□□□□□ -0.41
TnfP06804 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.47□□□□□ -0.41
TnfP06804 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.47□□□□□ -0.41
TnfP06804 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
TnfP06804 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.47□□□□□ -0.41
TnfP06804 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TnfP06804 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TnfP06804 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms