Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm3150-201ENSMUST00000166418 204 ntBASIC11.6□□□□□ -0.55
Hoxa4P06798 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.6□□□□□ -0.55
Hoxa4P06798 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm43138-201ENSMUST00000199123 708 ntBASIC11.6□□□□□ -0.55
Hoxa4P06798 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxa4P06798 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.6□□□□□ -0.55
Hoxa4P06798 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxa4P06798 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxa4P06798 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.59□□□□□ -0.55
Hoxa4P06798 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.59□□□□□ -0.55
Hoxa4P06798 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm24844-201ENSMUST00000158679 127 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm12407-201ENSMUST00000180219 324 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm4978-201ENSMUST00000071565 801 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.59□□□□□ -0.55
Hoxa4P06798 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxa4P06798 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Hoxa4P06798 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa4P06798 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Hoxa4P06798 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Hoxa4P06798 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm15352-201ENSMUST00000118696 270 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Hoxa4P06798 Gm23699-201ENSMUST00000158835 135 ntBASIC11.58□□□□□ -0.56
Hoxa4P06798 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms