Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm25201-201ENSMUST00000083093 170 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Mir483-201ENSMUST00000093631 73 ntBASIC12.95□□□□□ -0.34
Trdmt1O55055 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trdmt1O55055 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.95□□□□□ -0.34
Trdmt1O55055 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trdmt1O55055 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm4294-201ENSMUST00000105169 614 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm15549-201ENSMUST00000121595 622 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm42599-201ENSMUST00000201308 469 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trdmt1O55055 n-R5s185-201ENSMUST00000083953 119 ntBASIC12.94□□□□□ -0.34
Trdmt1O55055 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trdmt1O55055 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trdmt1O55055 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trdmt1O55055 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm13422-201ENSMUST00000118834 504 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm13022-201ENSMUST00000121181 285 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm15329-201ENSMUST00000121408 155 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm11960-201ENSMUST00000122068 925 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm27390-201ENSMUST00000184516 176 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm43380-201ENSMUST00000200421 220 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm18514-201ENSMUST00000218980 436 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm16380-201ENSMUST00000077997 478 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trdmt1O55055 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm37600-201ENSMUST00000193764 3292 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.93□□□□□ -0.34
Trdmt1O55055 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.93□□□□□ -0.34
Trdmt1O55055 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trdmt1O55055 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms