Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Gm31256-201ENSMUST00000194705 506 ntBASIC13.96□□□□□ -0.17
Smarce1O54941 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC13.96□□□□□ -0.17
Smarce1O54941 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Gm4607-201ENSMUST00000206649 577 ntBASIC13.96□□□□□ -0.17
Smarce1O54941 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Smarce1O54941 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smarce1O54941 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarce1O54941 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarce1O54941 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Smarce1O54941 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarce1O54941 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.18
Smarce1O54941 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smarce1O54941 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarce1O54941 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Smarce1O54941 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 AC154537.1-201ENSMUST00000226101 1304 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Smarce1O54941 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarce1O54941 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarce1O54941 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarce1O54941 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm11930-201ENSMUST00000117788 190 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarce1O54941 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarce1O54941 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm5070-201ENSMUST00000177599 862 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Gm5745-201ENSMUST00000183748 313 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm18054-201ENSMUST00000207539 555 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Gm45598-202ENSMUST00000210719 986 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Gm18935-201ENSMUST00000212692 664 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Gm2553-201ENSMUST00000215986 605 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Lect2-202ENSMUST00000225183 823 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm9823-201ENSMUST00000051212 327 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarce1O54941 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarce1O54941 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.95□□□□□ -0.18
Smarce1O54941 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smarce1O54941 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm14726-201ENSMUST00000120623 896 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Gm11660-201ENSMUST00000120955 412 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.94□□□□□ -0.18
Smarce1O54941 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.94□□□□□ -0.18
Smarce1O54941 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Smarce1O54941 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm18062-201ENSMUST00000208020 547 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Gm18055-201ENSMUST00000208254 547 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Gm5455-201ENSMUST00000058710 715 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarce1O54941 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.94□□□□□ -0.18
Smarce1O54941 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms