Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.78□□□□□ -0.36
Clk2O35491 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Clk2O35491 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.78□□□□□ -0.36
Clk2O35491 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Clk2O35491 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Clk2O35491 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Clk2O35491 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.77□□□□□ -0.36
Clk2O35491 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Clk2O35491 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Clk2O35491 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.77□□□□□ -0.36
Clk2O35491 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.77□□□□□ -0.37
Clk2O35491 Gm13888-201ENSMUST00000119148 422 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Gm11434-201ENSMUST00000122379 629 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.77□□□□□ -0.37
Clk2O35491 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.77□□□□□ -0.37
Clk2O35491 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.77□□□□□ -0.37
Clk2O35491 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Gm44545-201ENSMUST00000208262 746 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Gm8342-201ENSMUST00000209839 757 ntBASIC12.77□□□□□ -0.37
Clk2O35491 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC12.77□□□□□ -0.37
Clk2O35491 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.77□□□□□ -0.37
Clk2O35491 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Clk2O35491 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Clk2O35491 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.76□□□□□ -0.37
Clk2O35491 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.76□□□□□ -0.37
Clk2O35491 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Gm25076-201ENSMUST00000104098 132 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.76□□□□□ -0.37
Clk2O35491 Gm11244-201ENSMUST00000121243 237 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Gm6485-201ENSMUST00000160676 439 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Mir7076-201ENSMUST00000183519 74 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Gm3551-201ENSMUST00000190750 664 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.76□□□□□ -0.37
Clk2O35491 Gm37981-201ENSMUST00000194280 535 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC12.76□□□□□ -0.37
Clk2O35491 Gm8365-201ENSMUST00000197334 648 ntBASIC12.76□□□□□ -0.37
Clk2O35491 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Gm18065-201ENSMUST00000221395 526 ntBASIC12.76□□□□□ -0.37
Clk2O35491 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Clk2O35491 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Clk2O35491 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms