Protein–RNA interactions for Protein: O08540

Msmb, Beta-microseminoprotein, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MsmbO08540 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.08□□□□□ -0.96
MsmbO08540 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
MsmbO08540 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.08□□□□□ -0.96
MsmbO08540 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
MsmbO08540 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
MsmbO08540 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC9.08□□□□□ -0.96
MsmbO08540 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC9.08□□□□□ -0.96
MsmbO08540 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.08□□□□□ -0.96
MsmbO08540 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC9.07□□□□□ -0.96
MsmbO08540 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC9.07□□□□□ -0.96
MsmbO08540 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC9.07□□□□□ -0.96
MsmbO08540 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
MsmbO08540 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
MsmbO08540 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Gm15172-201ENSMUST00000118945 1046 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Gm13461-201ENSMUST00000120980 662 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Gm42599-201ENSMUST00000201308 469 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Gm7848-201ENSMUST00000210739 718 ntBASIC9.07□□□□□ -0.96
MsmbO08540 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Gm8959-201ENSMUST00000213150 571 ntBASIC9.07□□□□□ -0.96
MsmbO08540 AC153929.1-201ENSMUST00000219009 303 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Gm21811-201ENSMUST00000096485 930 ntBASIC9.07□□□□□ -0.96
MsmbO08540 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
MsmbO08540 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
MsmbO08540 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC9.07□□□□□ -0.96
MsmbO08540 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.06□□□□□ -0.96
MsmbO08540 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
MsmbO08540 Gm13035-201ENSMUST00000117496 342 ntBASIC9.06□□□□□ -0.96
MsmbO08540 Gm12857-201ENSMUST00000117678 592 ntBASIC9.06□□□□□ -0.96
MsmbO08540 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Gm8343-201ENSMUST00000182705 994 ntBASIC9.06□□□□□ -0.96
MsmbO08540 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
MsmbO08540 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms