Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Syngap1F6SEU4 Gm43417-201ENSMUST00000201586 5207 ntBASIC13.29□□□□□ -0.28
Syngap1F6SEU4 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm11949-201ENSMUST00000117640 372 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm11511-201ENSMUST00000118146 540 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm12453-201ENSMUST00000121981 331 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Rprl1-201ENSMUST00000158050 327 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm24943-201ENSMUST00000158329 433 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm15744-201ENSMUST00000161734 213 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Mir8115-201ENSMUST00000184992 119 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 BC106175-202ENSMUST00000219344 1213 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Gm4930-201ENSMUST00000219926 1087 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Syngap1F6SEU4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.28□□□□□ -0.28
Syngap1F6SEU4 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Gm7224-201ENSMUST00000121359 2066 ntBASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Syngap1F6SEU4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Gm14760-201ENSMUST00000121831 999 ntBASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Gm28686-201ENSMUST00000187404 609 ntBASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Gm42433-201ENSMUST00000196806 940 ntBASIC13.27□□□□□ -0.29
Syngap1F6SEU4 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Syngap1F6SEU4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Syngap1F6SEU4 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms