Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Clca3bE9PUL3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm6108-201ENSMUST00000208365 367 ntBASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Clca3bE9PUL3 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm4726-201ENSMUST00000135604 736 ntBASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm6019-201ENSMUST00000148369 736 ntBASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Clca3bE9PUL3 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clca3bE9PUL3 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC12.65□□□□□ -0.39
Clca3bE9PUL3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Clca3bE9PUL3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Clca3bE9PUL3 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Clca3bE9PUL3 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms