Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm2991-201ENSMUST00000173338 480 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm44882-201ENSMUST00000205702 802 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm45331-201ENSMUST00000209868 554 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm30285-201ENSMUST00000214614 422 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 AC132446.1-201ENSMUST00000222655 226 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Gm28043E0CXC2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm28043E0CXC2 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Gm28043E0CXC2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm15198-201ENSMUST00000117283 177 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm14726-201ENSMUST00000120623 896 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm14832-201ENSMUST00000121289 322 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 AC154319.1-201ENSMUST00000216330 312 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 AL589735.1-201ENSMUST00000224353 270 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Cts7-204ENSMUST00000225321 1257 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.83□□□□□ -0.52
Gm28043E0CXC2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Gm28043E0CXC2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms