Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Cfap99A0A140LIX9 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cfap99A0A140LIX9 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 AC091458.1-201ENSMUST00000220902 1361 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm9072-201ENSMUST00000218390 1514 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm15573-201ENSMUST00000119487 540 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm8199-201ENSMUST00000121323 823 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm19287-201ENSMUST00000203190 358 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cfap99A0A140LIX9 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Gm16397-201ENSMUST00000122201 494 ntBASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Rprl1-201ENSMUST00000158050 327 ntBASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Cfap99A0A140LIX9 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm11509-201ENSMUST00000117358 325 ntBASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm7722-201ENSMUST00000120646 741 ntBASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cfap99A0A140LIX9 Gm7593-201ENSMUST00000187246 644 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms