Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Speer3W4VSP1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.7■□□□□ 0.9
Speer3W4VSP1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.7■□□□□ 0.9
Speer3W4VSP1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.7■□□□□ 0.9
Speer3W4VSP1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Speer3W4VSP1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Speer3W4VSP1 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Speer3W4VSP1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Speer3W4VSP1 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.68■□□□□ 0.9
Speer3W4VSP1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Speer3W4VSP1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Speer3W4VSP1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Speer3W4VSP1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.67■□□□□ 0.9
Speer3W4VSP1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Speer3W4VSP1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.66■□□□□ 0.9
Speer3W4VSP1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Speer3W4VSP1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Speer3W4VSP1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Speer3W4VSP1 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Speer3W4VSP1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Speer3W4VSP1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Speer3W4VSP1 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Gm5921-201ENSMUST00000075898 882 ntBASIC20.63■□□□□ 0.89
Speer3W4VSP1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.63■□□□□ 0.89
Speer3W4VSP1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Speer3W4VSP1 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Speer3W4VSP1 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.62■□□□□ 0.89
Speer3W4VSP1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Speer3W4VSP1 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms