Protein–RNA interactions for Protein: S4R1W1

Gm3839, Glyceraldehyde-3-phosphate dehydrogenase, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3839S4R1W1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm3839S4R1W1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3839S4R1W1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Gm3839S4R1W1 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Gm3839S4R1W1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm3839S4R1W1 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm3839S4R1W1 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3839S4R1W1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Gm3839S4R1W1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm3839S4R1W1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3839S4R1W1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3839S4R1W1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm3839S4R1W1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm3839S4R1W1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm3839S4R1W1 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC18.32■□□□□ 0.52
Gm3839S4R1W1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm3839S4R1W1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Gm22238-201ENSMUST00000175222 88 ntBASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm3839S4R1W1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3839S4R1W1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3839S4R1W1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.29■□□□□ 0.52
Gm3839S4R1W1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Gm3839S4R1W1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm3839S4R1W1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm3839S4R1W1 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm3839S4R1W1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm3839S4R1W1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3839S4R1W1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm3839S4R1W1 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm3839S4R1W1 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm3839S4R1W1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms