Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Smarcb1Q9Z0H3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Smarcb1Q9Z0H3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Smarcb1Q9Z0H3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
Smarcb1Q9Z0H3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Smarcb1Q9Z0H3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcb1Q9Z0H3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcb1Q9Z0H3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Smarcb1Q9Z0H3 Serp2-204ENSMUST00000228055 705 ntBASIC21.38■■□□□ 1.01
Smarcb1Q9Z0H3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.38■■□□□ 1.01
Smarcb1Q9Z0H3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcb1Q9Z0H3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcb1Q9Z0H3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.37■■□□□ 1.01
Smarcb1Q9Z0H3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcb1Q9Z0H3 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Smarcb1Q9Z0H3 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Smarcb1Q9Z0H3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Smarcb1Q9Z0H3 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Smarcb1Q9Z0H3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Mir7075-201ENSMUST00000184187 82 ntBASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Gm6139-201ENSMUST00000079261 882 ntBASIC21.33■■□□□ 1.01
Smarcb1Q9Z0H3 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smarcb1Q9Z0H3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.33■■□□□ 1
Smarcb1Q9Z0H3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Smarcb1Q9Z0H3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Smarcb1Q9Z0H3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcb1Q9Z0H3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcb1Q9Z0H3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.32■■□□□ 1
Smarcb1Q9Z0H3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Smarcb1Q9Z0H3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Smarcb1Q9Z0H3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Smarcb1Q9Z0H3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcb1Q9Z0H3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcb1Q9Z0H3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smarcb1Q9Z0H3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.29■■□□□ 1
Smarcb1Q9Z0H3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.29■■□□□ 1
Smarcb1Q9Z0H3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms