Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CcsQ9WU84 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CcsQ9WU84 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CcsQ9WU84 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CcsQ9WU84 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CcsQ9WU84 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CcsQ9WU84 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.74■□□□□ 0.11
CcsQ9WU84 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.73■□□□□ 0.11
CcsQ9WU84 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC15.73■□□□□ 0.11
CcsQ9WU84 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.73■□□□□ 0.11
CcsQ9WU84 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CcsQ9WU84 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CcsQ9WU84 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC15.72■□□□□ 0.11
CcsQ9WU84 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CcsQ9WU84 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CcsQ9WU84 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CcsQ9WU84 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.71■□□□□ 0.11
CcsQ9WU84 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.71■□□□□ 0.11
CcsQ9WU84 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CcsQ9WU84 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
CcsQ9WU84 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CcsQ9WU84 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CcsQ9WU84 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC15.7■□□□□ 0.1
CcsQ9WU84 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CcsQ9WU84 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CcsQ9WU84 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CcsQ9WU84 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.69■□□□□ 0.1
CcsQ9WU84 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Gm10420-201ENSMUST00000121713 882 ntBASIC15.69■□□□□ 0.1
CcsQ9WU84 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
CcsQ9WU84 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CcsQ9WU84 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CcsQ9WU84 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.68■□□□□ 0.1
CcsQ9WU84 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC15.68■□□□□ 0.1
CcsQ9WU84 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CcsQ9WU84 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CcsQ9WU84 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CcsQ9WU84 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcsQ9WU84 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
CcsQ9WU84 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcsQ9WU84 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CcsQ9WU84 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms