Protein–RNA interactions for Protein: Q9R0A1

Clcn2, Chloride channel protein 2, mousemouse

Predictions only

Length 908 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn2Q9R0A1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Clcn2Q9R0A1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Clcn2Q9R0A1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Clcn2Q9R0A1 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn2Q9R0A1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn2Q9R0A1 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.92■□□□□ 0.94
Clcn2Q9R0A1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn2Q9R0A1 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Clcn2Q9R0A1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Clcn2Q9R0A1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.9■□□□□ 0.94
Clcn2Q9R0A1 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Clcn2Q9R0A1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Clcn2Q9R0A1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Clcn2Q9R0A1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Gm10232-201ENSMUST00000089221 720 ntBASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Clcn2Q9R0A1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn2Q9R0A1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn2Q9R0A1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.86■□□□□ 0.93
Clcn2Q9R0A1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn2Q9R0A1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Clcn2Q9R0A1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Clcn2Q9R0A1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Clcn2Q9R0A1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 141.8 ms