Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.89■□□□□ 0.45
Nubp1Q9R060 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Nubp1Q9R060 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Nubp1Q9R060 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.87■□□□□ 0.45
Nubp1Q9R060 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.87■□□□□ 0.45
Nubp1Q9R060 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Nubp1Q9R060 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nubp1Q9R060 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Nubp1Q9R060 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Nubp1Q9R060 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Nubp1Q9R060 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Gm26833-201ENSMUST00000180899 440 ntBASIC17.85■□□□□ 0.45
Nubp1Q9R060 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nubp1Q9R060 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.84■□□□□ 0.45
Nubp1Q9R060 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm43060-201ENSMUST00000200621 289 ntBASIC17.84■□□□□ 0.45
Nubp1Q9R060 Gm42642-201ENSMUST00000200683 355 ntBASIC17.84■□□□□ 0.45
Nubp1Q9R060 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nubp1Q9R060 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nubp1Q9R060 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.83■□□□□ 0.44
Nubp1Q9R060 Gm37179-201ENSMUST00000194862 823 ntBASIC17.83■□□□□ 0.44
Nubp1Q9R060 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nubp1Q9R060 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nubp1Q9R060 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nubp1Q9R060 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nubp1Q9R060 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gm42790-201ENSMUST00000201268 969 ntBASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nubp1Q9R060 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Gm26571-201ENSMUST00000181399 666 ntBASIC17.81■□□□□ 0.44
Nubp1Q9R060 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nubp1Q9R060 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nubp1Q9R060 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.8■□□□□ 0.44
Nubp1Q9R060 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.8■□□□□ 0.44
Nubp1Q9R060 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.8■□□□□ 0.44
Nubp1Q9R060 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nubp1Q9R060 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms