Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.76■□□□□ 0.91
Rnf4Q9QZS2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Rnf4Q9QZS2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf4Q9QZS2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Rnf4Q9QZS2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rnf4Q9QZS2 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Gm44428-201ENSMUST00000204474 874 ntBASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rnf4Q9QZS2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf4Q9QZS2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf4Q9QZS2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf4Q9QZS2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rnf4Q9QZS2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf4Q9QZS2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf4Q9QZS2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf4Q9QZS2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf4Q9QZS2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.66■□□□□ 0.9
Rnf4Q9QZS2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf4Q9QZS2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms