Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.41■□□□□ 0.54
Sec61a2Q9JLR1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Gm10232-201ENSMUST00000089221 720 ntBASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sec61a2Q9JLR1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Sec61a2Q9JLR1 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.39■□□□□ 0.53
Sec61a2Q9JLR1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.39■□□□□ 0.53
Sec61a2Q9JLR1 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.39■□□□□ 0.53
Sec61a2Q9JLR1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Sec61a2Q9JLR1 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Sec61a2Q9JLR1 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Sec61a2Q9JLR1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a2Q9JLR1 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.36■□□□□ 0.53
Sec61a2Q9JLR1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a2Q9JLR1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a2Q9JLR1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sec61a2Q9JLR1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sec61a2Q9JLR1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Sec61a2Q9JLR1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a2Q9JLR1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a2Q9JLR1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sec61a2Q9JLR1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a2Q9JLR1 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Sec61a2Q9JLR1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.33■□□□□ 0.52
Sec61a2Q9JLR1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sec61a2Q9JLR1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sec61a2Q9JLR1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sec61a2Q9JLR1 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.29■□□□□ 0.52
Sec61a2Q9JLR1 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms