Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Upk3aQ9JKX8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Upk3aQ9JKX8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Gm9870-201ENSMUST00000063874 645 ntBASIC19.88■□□□□ 0.77
Upk3aQ9JKX8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Upk3aQ9JKX8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Upk3aQ9JKX8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Upk3aQ9JKX8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3aQ9JKX8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Upk3aQ9JKX8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3aQ9JKX8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3aQ9JKX8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Upk3aQ9JKX8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.83■□□□□ 0.77
Upk3aQ9JKX8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.83■□□□□ 0.76
Upk3aQ9JKX8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3aQ9JKX8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3aQ9JKX8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3aQ9JKX8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Upk3aQ9JKX8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.82■□□□□ 0.76
Upk3aQ9JKX8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3aQ9JKX8 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3aQ9JKX8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3aQ9JKX8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Upk3aQ9JKX8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Upk3aQ9JKX8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Upk3aQ9JKX8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Upk3aQ9JKX8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Upk3aQ9JKX8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms