Protein–RNA interactions for Protein: Q9JIG8

Praf2, PRA1 family protein 2, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Praf2Q9JIG8 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Praf2Q9JIG8 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Praf2Q9JIG8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Praf2Q9JIG8 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.24■□□□□ 0.51
Praf2Q9JIG8 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Praf2Q9JIG8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Praf2Q9JIG8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Praf2Q9JIG8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Praf2Q9JIG8 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Praf2Q9JIG8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Praf2Q9JIG8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.19■□□□□ 0.5
Praf2Q9JIG8 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Praf2Q9JIG8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
Praf2Q9JIG8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Praf2Q9JIG8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Gm44428-201ENSMUST00000204474 874 ntBASIC18.18■□□□□ 0.5
Praf2Q9JIG8 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Praf2Q9JIG8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Praf2Q9JIG8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.16■□□□□ 0.5
Praf2Q9JIG8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Praf2Q9JIG8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.16■□□□□ 0.5
Praf2Q9JIG8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms