Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tubb3Q9ERD7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Tubb3Q9ERD7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tubb3Q9ERD7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tubb3Q9ERD7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tubb3Q9ERD7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Golph3-202ENSMUST00000226517 2359 ntBASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
Tubb3Q9ERD7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tubb3Q9ERD7 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tubb3Q9ERD7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubb3Q9ERD7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tubb3Q9ERD7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.31■□□□□ 0.84
Tubb3Q9ERD7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.31■□□□□ 0.84
Tubb3Q9ERD7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Tubb3Q9ERD7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Tubb3Q9ERD7 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.29■□□□□ 0.84
Tubb3Q9ERD7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms