Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vmn1r40Q9EQ46 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.48■□□□□ 0.71
Vmn1r40Q9EQ46 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vmn1r40Q9EQ46 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Gm43137-201ENSMUST00000198052 594 ntBASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vmn1r40Q9EQ46 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vmn1r40Q9EQ46 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Vmn1r40Q9EQ46 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Vmn1r40Q9EQ46 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Vmn1r40Q9EQ46 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Vmn1r40Q9EQ46 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Serp2-204ENSMUST00000228055 705 ntBASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Vmn1r40Q9EQ46 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.39■□□□□ 0.69
Vmn1r40Q9EQ46 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.39■□□□□ 0.69
Vmn1r40Q9EQ46 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.39■□□□□ 0.69
Vmn1r40Q9EQ46 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r40Q9EQ46 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Vmn1r40Q9EQ46 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Vmn1r40Q9EQ46 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Vmn1r40Q9EQ46 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms