Protein–RNA interactions for Protein: Q9D9H2

Cldnd2, Claudin domain-containing protein 2, mousemouse

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd2Q9D9H2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
Cldnd2Q9D9H2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd2Q9D9H2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd2Q9D9H2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldnd2Q9D9H2 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldnd2Q9D9H2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldnd2Q9D9H2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.64■□□□□ 0.42
Cldnd2Q9D9H2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldnd2Q9D9H2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cldnd2Q9D9H2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cldnd2Q9D9H2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cldnd2Q9D9H2 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.6■□□□□ 0.41
Cldnd2Q9D9H2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Cldnd2Q9D9H2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.6■□□□□ 0.41
Cldnd2Q9D9H2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.6■□□□□ 0.41
Cldnd2Q9D9H2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Cldnd2Q9D9H2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cldnd2Q9D9H2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cldnd2Q9D9H2 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.41
Cldnd2Q9D9H2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cldnd2Q9D9H2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd2Q9D9H2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd2Q9D9H2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldnd2Q9D9H2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 169.7 ms