Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim42Q9D2H5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trim42Q9D2H5 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim42Q9D2H5 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim42Q9D2H5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim42Q9D2H5 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim42Q9D2H5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim42Q9D2H5 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim42Q9D2H5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim42Q9D2H5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim42Q9D2H5 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim42Q9D2H5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim42Q9D2H5 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trim42Q9D2H5 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.33■□□□□ 0.85
Trim42Q9D2H5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.33■□□□□ 0.84
Trim42Q9D2H5 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trim42Q9D2H5 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim42Q9D2H5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trim42Q9D2H5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim42Q9D2H5 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim42Q9D2H5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim42Q9D2H5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Gm6311-201ENSMUST00000073790 878 ntBASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Trim42Q9D2H5 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim42Q9D2H5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim42Q9D2H5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim42Q9D2H5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim42Q9D2H5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim42Q9D2H5 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim42Q9D2H5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim42Q9D2H5 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim42Q9D2H5 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim42Q9D2H5 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim42Q9D2H5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms