Protein–RNA interactions for Protein: Q9CXE0

Prdm5, PR domain zinc finger protein 5, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm5Q9CXE0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Prdm5Q9CXE0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Prdm5Q9CXE0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Prdm5Q9CXE0 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Prdm5Q9CXE0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Prdm5Q9CXE0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Prdm5Q9CXE0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Prdm5Q9CXE0 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm5Q9CXE0 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.34■□□□□ 0.69
Prdm5Q9CXE0 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.34■□□□□ 0.69
Prdm5Q9CXE0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Prdm5Q9CXE0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Prdm5Q9CXE0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Prdm5Q9CXE0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Prdm5Q9CXE0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Prdm5Q9CXE0 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Prdm5Q9CXE0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Prdm5Q9CXE0 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Gm40881-201ENSMUST00000223397 166 ntBASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Prdm5Q9CXE0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm5Q9CXE0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms