Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1Q9CQ70 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
H2afb1Q9CQ70 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Gm43566-201ENSMUST00000196851 808 ntBASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
H2afb1Q9CQ70 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
H2afb1Q9CQ70 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.79■□□□□ 0.28
H2afb1Q9CQ70 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
H2afb1Q9CQ70 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
H2afb1Q9CQ70 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1Q9CQ70 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1Q9CQ70 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.77■□□□□ 0.27
H2afb1Q9CQ70 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
H2afb1Q9CQ70 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
H2afb1Q9CQ70 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Gm13238-201ENSMUST00000117655 780 ntBASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
H2afb1Q9CQ70 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.74■□□□□ 0.27
H2afb1Q9CQ70 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Gm10399-202ENSMUST00000202768 748 ntBASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
H2afb1Q9CQ70 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms