Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
Col25a1Q99MQ5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Gm13836-201ENSMUST00000121159 501 ntBASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.43■■□□□ 1.02
Col25a1Q99MQ5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
Col25a1Q99MQ5 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Col25a1Q99MQ5 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
Col25a1Q99MQ5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Col25a1Q99MQ5 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Gm42778-201ENSMUST00000199644 553 ntBASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Col25a1Q99MQ5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col25a1Q99MQ5 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col25a1Q99MQ5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Col25a1Q99MQ5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col25a1Q99MQ5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Col25a1Q99MQ5 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Col25a1Q99MQ5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Col25a1Q99MQ5 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Col25a1Q99MQ5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Col25a1Q99MQ5 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Col25a1Q99MQ5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Col25a1Q99MQ5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Col25a1Q99MQ5 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.34■■□□□ 1.01
Col25a1Q99MQ5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Col25a1Q99MQ5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Col25a1Q99MQ5 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Col25a1Q99MQ5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Col25a1Q99MQ5 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col25a1Q99MQ5 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col25a1Q99MQ5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Col25a1Q99MQ5 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Col25a1Q99MQ5 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.32■■□□□ 1
Col25a1Q99MQ5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Col25a1Q99MQ5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col25a1Q99MQ5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col25a1Q99MQ5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Col25a1Q99MQ5 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.32■■□□□ 1
Col25a1Q99MQ5 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms