Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1b1Q99LU0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.3■□□□□ 0.68
Chmp1b1Q99LU0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.3■□□□□ 0.68
Chmp1b1Q99LU0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Chmp1b1Q99LU0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Chmp1b1Q99LU0 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.29■□□□□ 0.68
Chmp1b1Q99LU0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp1b1Q99LU0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1b1Q99LU0 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1b1Q99LU0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1b1Q99LU0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp1b1Q99LU0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp1b1Q99LU0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp1b1Q99LU0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp1b1Q99LU0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Chmp1b1Q99LU0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp1b1Q99LU0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp1b1Q99LU0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chmp1b1Q99LU0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.24■□□□□ 0.67
Chmp1b1Q99LU0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.24■□□□□ 0.67
Chmp1b1Q99LU0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1b1Q99LU0 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp1b1Q99LU0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Chmp1b1Q99LU0 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp1b1Q99LU0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp1b1Q99LU0 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp1b1Q99LU0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp1b1Q99LU0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp1b1Q99LU0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Chmp1b1Q99LU0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.19■□□□□ 0.66
Chmp1b1Q99LU0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp1b1Q99LU0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms