Protein–RNA interactions for Protein: Q99246

Cacna1d, Voltage-dependent L-type calcium channel subunit alpha-1D, mousemouse

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1dQ99246 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1dQ99246 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Cacna1dQ99246 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1dQ99246 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1dQ99246 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Cacna1dQ99246 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.5■□□□□ 0.87
Cacna1dQ99246 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.49■□□□□ 0.87
Cacna1dQ99246 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
Cacna1dQ99246 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
Cacna1dQ99246 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Cacna1dQ99246 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1dQ99246 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Gm43173-201ENSMUST00000202246 593 ntBASIC20.46■□□□□ 0.87
Cacna1dQ99246 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.46■□□□□ 0.87
Cacna1dQ99246 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1dQ99246 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1dQ99246 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1dQ99246 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1dQ99246 Gm43017-201ENSMUST00000198296 752 ntBASIC20.44■□□□□ 0.86
Cacna1dQ99246 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.44■□□□□ 0.86
Cacna1dQ99246 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1dQ99246 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1dQ99246 Gm43530-201ENSMUST00000195920 274 ntBASIC20.44■□□□□ 0.86
Cacna1dQ99246 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.43■□□□□ 0.86
Cacna1dQ99246 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.43■□□□□ 0.86
Cacna1dQ99246 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.43■□□□□ 0.86
Cacna1dQ99246 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1dQ99246 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1dQ99246 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.42■□□□□ 0.86
Cacna1dQ99246 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1dQ99246 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cacna1dQ99246 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.42■□□□□ 0.86
Cacna1dQ99246 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.42■□□□□ 0.86
Cacna1dQ99246 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1dQ99246 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Gm18284-201ENSMUST00000172604 624 ntBASIC20.41■□□□□ 0.86
Cacna1dQ99246 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Cacna1dQ99246 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms