Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb20Q91XZ9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb20Q91XZ9 Gm11434-201ENSMUST00000122379 629 ntBASIC19.69■□□□□ 0.74
Pcdhb20Q91XZ9 Gm21956-201ENSMUST00000179946 522 ntBASIC19.69■□□□□ 0.74
Pcdhb20Q91XZ9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb20Q91XZ9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pcdhb20Q91XZ9 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pcdhb20Q91XZ9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pcdhb20Q91XZ9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdhb20Q91XZ9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Pcdhb20Q91XZ9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Gm18558-201ENSMUST00000186253 1214 ntBASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdhb20Q91XZ9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdhb20Q91XZ9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Gm15039-201ENSMUST00000118914 875 ntBASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhb20Q91XZ9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhb20Q91XZ9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Gm12821-201ENSMUST00000120022 600 ntBASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Gm25007-201ENSMUST00000083808 133 ntBASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdhb20Q91XZ9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms