Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhb6Q91XZ4 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.18■□□□□ 0.98
Pcdhb6Q91XZ4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.17■□□□□ 0.98
Pcdhb6Q91XZ4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhb6Q91XZ4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdhb6Q91XZ4 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Pcdhb6Q91XZ4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb6Q91XZ4 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhb6Q91XZ4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb6Q91XZ4 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb6Q91XZ4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb6Q91XZ4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb6Q91XZ4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhb6Q91XZ4 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhb6Q91XZ4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.12■□□□□ 0.97
Pcdhb6Q91XZ4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdhb6Q91XZ4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb6Q91XZ4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb6Q91XZ4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb6Q91XZ4 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhb6Q91XZ4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhb6Q91XZ4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Gm7143-201ENSMUST00000222811 859 ntBASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhb6Q91XZ4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhb6Q91XZ4 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhb6Q91XZ4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdhb6Q91XZ4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms