Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Pcdhga6Q91XY2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhga6Q91XY2 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhga6Q91XY2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhga6Q91XY2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdhga6Q91XY2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhga6Q91XY2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhga6Q91XY2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhga6Q91XY2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhga6Q91XY2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Gm27405-201ENSMUST00000184201 112 ntBASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhga6Q91XY2 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Gm42569-201ENSMUST00000200539 472 ntBASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhga6Q91XY2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhga6Q91XY2 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.83
Pcdhga6Q91XY2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhga6Q91XY2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhga6Q91XY2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhga6Q91XY2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhga6Q91XY2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms