Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.18■□□□□ 0.34
H1fooQ8VIK3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
H1fooQ8VIK3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
H1fooQ8VIK3 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
H1fooQ8VIK3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
H1fooQ8VIK3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
H1fooQ8VIK3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Gm10232-201ENSMUST00000089221 720 ntBASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H1fooQ8VIK3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.12■□□□□ 0.33
H1fooQ8VIK3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H1fooQ8VIK3 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1fooQ8VIK3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.11■□□□□ 0.33
H1fooQ8VIK3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H1fooQ8VIK3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.11■□□□□ 0.33
H1fooQ8VIK3 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
H1fooQ8VIK3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Gm10399-202ENSMUST00000202768 748 ntBASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H1fooQ8VIK3 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H1fooQ8VIK3 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms